Cannot kill my lsof processes even as root

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My lsof is hung so bad that I can't even kill -9 it.



Initially, it was owned by another process, foo. I tried killing foo, hoping that lsof would also go way. But while I was able to kill -9 foo, now lsof appears to be owned by `upstart.



root@box 0 L1 ~
$ ps -ef | grep 'lsof|upstart' | grep 3575
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 3575 3331 0 Nov26 ? 00:00:01 /sbin/upstart --user
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Next, I try to get a list of PIDs of lsof processes.



root@box 130 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 '
1595
1603
1605
1614
4330
4353
4429
4435
4580


I try to kill them all (as root).



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 ' | xargs -n1 kill -9


But, they are still "hanging in" there. (pun intended)



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Notes:



  1. All of the above lsof commands were invoked by background tasks inside of foo.


  2. The lsof bar was invoked manually on the shell, and even it hung! I can Ctrl-C out of it. But it continues to show in the ps -ef listing.


Questions:



  1. Why is lsof hanging in the first place? All the files given as arguments to lsof are on a local ext4 filesystem of a Ubuntu 16.04 box.


  2. Why even kill -9 isn't able to kill these processes - even when run as root?


  3. Why I can Ctrl-C an interactively invoked lsof bar just fine but the lsof bar continues to show up in the ps -ef listing?










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  • 2




    Your second and third questions may find answers here.
    – fra-san
    Dec 8 at 9:31














up vote
0
down vote

favorite












My lsof is hung so bad that I can't even kill -9 it.



Initially, it was owned by another process, foo. I tried killing foo, hoping that lsof would also go way. But while I was able to kill -9 foo, now lsof appears to be owned by `upstart.



root@box 0 L1 ~
$ ps -ef | grep 'lsof|upstart' | grep 3575
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 3575 3331 0 Nov26 ? 00:00:01 /sbin/upstart --user
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Next, I try to get a list of PIDs of lsof processes.



root@box 130 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 '
1595
1603
1605
1614
4330
4353
4429
4435
4580


I try to kill them all (as root).



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 ' | xargs -n1 kill -9


But, they are still "hanging in" there. (pun intended)



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Notes:



  1. All of the above lsof commands were invoked by background tasks inside of foo.


  2. The lsof bar was invoked manually on the shell, and even it hung! I can Ctrl-C out of it. But it continues to show in the ps -ef listing.


Questions:



  1. Why is lsof hanging in the first place? All the files given as arguments to lsof are on a local ext4 filesystem of a Ubuntu 16.04 box.


  2. Why even kill -9 isn't able to kill these processes - even when run as root?


  3. Why I can Ctrl-C an interactively invoked lsof bar just fine but the lsof bar continues to show up in the ps -ef listing?










share|improve this question



















  • 2




    Your second and third questions may find answers here.
    – fra-san
    Dec 8 at 9:31












up vote
0
down vote

favorite









up vote
0
down vote

favorite











My lsof is hung so bad that I can't even kill -9 it.



Initially, it was owned by another process, foo. I tried killing foo, hoping that lsof would also go way. But while I was able to kill -9 foo, now lsof appears to be owned by `upstart.



root@box 0 L1 ~
$ ps -ef | grep 'lsof|upstart' | grep 3575
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 3575 3331 0 Nov26 ? 00:00:01 /sbin/upstart --user
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Next, I try to get a list of PIDs of lsof processes.



root@box 130 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 '
1595
1603
1605
1614
4330
4353
4429
4435
4580


I try to kill them all (as root).



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 ' | xargs -n1 kill -9


But, they are still "hanging in" there. (pun intended)



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Notes:



  1. All of the above lsof commands were invoked by background tasks inside of foo.


  2. The lsof bar was invoked manually on the shell, and even it hung! I can Ctrl-C out of it. But it continues to show in the ps -ef listing.


Questions:



  1. Why is lsof hanging in the first place? All the files given as arguments to lsof are on a local ext4 filesystem of a Ubuntu 16.04 box.


  2. Why even kill -9 isn't able to kill these processes - even when run as root?


  3. Why I can Ctrl-C an interactively invoked lsof bar just fine but the lsof bar continues to show up in the ps -ef listing?










share|improve this question















My lsof is hung so bad that I can't even kill -9 it.



Initially, it was owned by another process, foo. I tried killing foo, hoping that lsof would also go way. But while I was able to kill -9 foo, now lsof appears to be owned by `upstart.



root@box 0 L1 ~
$ ps -ef | grep 'lsof|upstart' | grep 3575
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 3575 3331 0 Nov26 ? 00:00:01 /sbin/upstart --user
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Next, I try to get a list of PIDs of lsof processes.



root@box 130 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 '
1595
1603
1605
1614
4330
4353
4429
4435
4580


I try to kill them all (as root).



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep | gawk ' print $2 ' | xargs -n1 kill -9


But, they are still "hanging in" there. (pun intended)



root@box 0 L1 ~
$ ps -ef | grep lsof | grep -v grep
joe 1595 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 1603 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.13
joe 1605 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 1614 3575 0 12:43 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.16
joe 4330 3575 0 12:53 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4353 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4429 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.18
joe 4435 3575 0 12:54 pts/5 00:00:00 lsof /home/joe/tmp/a a/file.11
joe 4580 3575 0 12:55 pts/5 00:00:00 lsof bar


Notes:



  1. All of the above lsof commands were invoked by background tasks inside of foo.


  2. The lsof bar was invoked manually on the shell, and even it hung! I can Ctrl-C out of it. But it continues to show in the ps -ef listing.


Questions:



  1. Why is lsof hanging in the first place? All the files given as arguments to lsof are on a local ext4 filesystem of a Ubuntu 16.04 box.


  2. Why even kill -9 isn't able to kill these processes - even when run as root?


  3. Why I can Ctrl-C an interactively invoked lsof bar just fine but the lsof bar continues to show up in the ps -ef listing?







root kill lsof hang






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edited Dec 8 at 9:04

























asked Dec 8 at 8:58









Harry

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  • 2




    Your second and third questions may find answers here.
    – fra-san
    Dec 8 at 9:31












  • 2




    Your second and third questions may find answers here.
    – fra-san
    Dec 8 at 9:31







2




2




Your second and third questions may find answers here.
– fra-san
Dec 8 at 9:31




Your second and third questions may find answers here.
– fra-san
Dec 8 at 9:31















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