high load, top shows 70+% I/O wait, iotop shows nothing

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From time to time I experience a strange effect (without any obvious cause):



  1. My system suddenly gets very slow.


  2. top shows high load (10 to 40 on four cores)


  3. top shows I/O wait values mainly from 60% to 80%

Until here it makes sense. But:




  1. top does not show a single process in D state (in CPU usage sort order)


  2. iotop shows nearly nothing (<100K/s read from disk, writes are buffered with high commit values anyway), sometimes literally noting.

  3. Nothing interesting in the output of dmesg.

Now I have closes several applications and half of the tabs in chrome. The system has become usable again – despite a load of 10 and 70% I/O wait. top claims that oon average 1 to 2 processes were running. With 80% I/O wait two processes make a load of ten. So at least that makes sense but where does the load / I/O wait come from?



environment



  • This is openSUSE Tumbleweed

  • It has been running for 33 days

  • The system has 24G RAM, 4 of which are free yet (completely free, in addition to the 6G page cache)






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  • "top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
    – Patrick
    Apr 20 at 2:51














up vote
0
down vote

favorite












From time to time I experience a strange effect (without any obvious cause):



  1. My system suddenly gets very slow.


  2. top shows high load (10 to 40 on four cores)


  3. top shows I/O wait values mainly from 60% to 80%

Until here it makes sense. But:




  1. top does not show a single process in D state (in CPU usage sort order)


  2. iotop shows nearly nothing (<100K/s read from disk, writes are buffered with high commit values anyway), sometimes literally noting.

  3. Nothing interesting in the output of dmesg.

Now I have closes several applications and half of the tabs in chrome. The system has become usable again – despite a load of 10 and 70% I/O wait. top claims that oon average 1 to 2 processes were running. With 80% I/O wait two processes make a load of ten. So at least that makes sense but where does the load / I/O wait come from?



environment



  • This is openSUSE Tumbleweed

  • It has been running for 33 days

  • The system has 24G RAM, 4 of which are free yet (completely free, in addition to the 6G page cache)






share|improve this question



















  • "top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
    – Patrick
    Apr 20 at 2:51












up vote
0
down vote

favorite









up vote
0
down vote

favorite











From time to time I experience a strange effect (without any obvious cause):



  1. My system suddenly gets very slow.


  2. top shows high load (10 to 40 on four cores)


  3. top shows I/O wait values mainly from 60% to 80%

Until here it makes sense. But:




  1. top does not show a single process in D state (in CPU usage sort order)


  2. iotop shows nearly nothing (<100K/s read from disk, writes are buffered with high commit values anyway), sometimes literally noting.

  3. Nothing interesting in the output of dmesg.

Now I have closes several applications and half of the tabs in chrome. The system has become usable again – despite a load of 10 and 70% I/O wait. top claims that oon average 1 to 2 processes were running. With 80% I/O wait two processes make a load of ten. So at least that makes sense but where does the load / I/O wait come from?



environment



  • This is openSUSE Tumbleweed

  • It has been running for 33 days

  • The system has 24G RAM, 4 of which are free yet (completely free, in addition to the 6G page cache)






share|improve this question











From time to time I experience a strange effect (without any obvious cause):



  1. My system suddenly gets very slow.


  2. top shows high load (10 to 40 on four cores)


  3. top shows I/O wait values mainly from 60% to 80%

Until here it makes sense. But:




  1. top does not show a single process in D state (in CPU usage sort order)


  2. iotop shows nearly nothing (<100K/s read from disk, writes are buffered with high commit values anyway), sometimes literally noting.

  3. Nothing interesting in the output of dmesg.

Now I have closes several applications and half of the tabs in chrome. The system has become usable again – despite a load of 10 and 70% I/O wait. top claims that oon average 1 to 2 processes were running. With 80% I/O wait two processes make a load of ten. So at least that makes sense but where does the load / I/O wait come from?



environment



  • This is openSUSE Tumbleweed

  • It has been running for 33 days

  • The system has 24G RAM, 4 of which are free yet (completely free, in addition to the 6G page cache)








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asked Apr 19 at 20:41









Hauke Laging

53.2k1282130




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  • "top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
    – Patrick
    Apr 20 at 2:51
















  • "top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
    – Patrick
    Apr 20 at 2:51















"top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
– Patrick
Apr 20 at 2:51




"top does not show a single process in D state" -- are you running it as top -H so you see threads? Also do f, s, q, Shift+R to sort by process state and put D at the top. Or use ps axH | awk '$7 ~ /D/ print '
– Patrick
Apr 20 at 2:51















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