Combine files into one [duplicate]

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  • Print two files in two columns

    4 answers



If I have a folder with the following file names:



cluster_sizes_0.txt
cluster_sizes_1.txt
cluster_size_2.txt


etc.



Each file contains a single column of values.



Is there a command within linux such that I could combine all files into cluster_all.txt?



The first column in this new file would correspond to cluster_sizes_0.txt, the second column would be cluster_sizes_1.txt etc.



There could be as many as 200 cluster txt files, but it changes for each folder. I am looking for a way to combine these files, instead of copying each one by one.



Also, I need to make sure they are pasted into the file in order. This may have some issues with the numbering system, since I only include single digits if below 10.



For instance:



paste cluster_size.* > cluster_all.txt doesn't paste them in order due to the numbering. How can I fix the numbering without manually changing all of them?







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marked as duplicate by αғsнιη, Jesse_b, slm♦ Jul 29 at 4:24


This question has been asked before and already has an answer. If those answers do not fully address your question, please ask a new question.














  • If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
    – steeldriver
    Jul 28 at 17:33
















up vote
0
down vote

favorite













This question already has an answer here:



  • Print two files in two columns

    4 answers



If I have a folder with the following file names:



cluster_sizes_0.txt
cluster_sizes_1.txt
cluster_size_2.txt


etc.



Each file contains a single column of values.



Is there a command within linux such that I could combine all files into cluster_all.txt?



The first column in this new file would correspond to cluster_sizes_0.txt, the second column would be cluster_sizes_1.txt etc.



There could be as many as 200 cluster txt files, but it changes for each folder. I am looking for a way to combine these files, instead of copying each one by one.



Also, I need to make sure they are pasted into the file in order. This may have some issues with the numbering system, since I only include single digits if below 10.



For instance:



paste cluster_size.* > cluster_all.txt doesn't paste them in order due to the numbering. How can I fix the numbering without manually changing all of them?







share|improve this question













marked as duplicate by αғsнιη, Jesse_b, slm♦ Jul 29 at 4:24


This question has been asked before and already has an answer. If those answers do not fully address your question, please ask a new question.














  • If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
    – steeldriver
    Jul 28 at 17:33












up vote
0
down vote

favorite









up vote
0
down vote

favorite












This question already has an answer here:



  • Print two files in two columns

    4 answers



If I have a folder with the following file names:



cluster_sizes_0.txt
cluster_sizes_1.txt
cluster_size_2.txt


etc.



Each file contains a single column of values.



Is there a command within linux such that I could combine all files into cluster_all.txt?



The first column in this new file would correspond to cluster_sizes_0.txt, the second column would be cluster_sizes_1.txt etc.



There could be as many as 200 cluster txt files, but it changes for each folder. I am looking for a way to combine these files, instead of copying each one by one.



Also, I need to make sure they are pasted into the file in order. This may have some issues with the numbering system, since I only include single digits if below 10.



For instance:



paste cluster_size.* > cluster_all.txt doesn't paste them in order due to the numbering. How can I fix the numbering without manually changing all of them?







share|improve this question














This question already has an answer here:



  • Print two files in two columns

    4 answers



If I have a folder with the following file names:



cluster_sizes_0.txt
cluster_sizes_1.txt
cluster_size_2.txt


etc.



Each file contains a single column of values.



Is there a command within linux such that I could combine all files into cluster_all.txt?



The first column in this new file would correspond to cluster_sizes_0.txt, the second column would be cluster_sizes_1.txt etc.



There could be as many as 200 cluster txt files, but it changes for each folder. I am looking for a way to combine these files, instead of copying each one by one.



Also, I need to make sure they are pasted into the file in order. This may have some issues with the numbering system, since I only include single digits if below 10.



For instance:



paste cluster_size.* > cluster_all.txt doesn't paste them in order due to the numbering. How can I fix the numbering without manually changing all of them?





This question already has an answer here:



  • Print two files in two columns

    4 answers









share|improve this question












share|improve this question




share|improve this question








edited Jul 29 at 4:23









slm♦

232k65479649




232k65479649









asked Jul 28 at 16:59









Jackson Hart

1184




1184




marked as duplicate by αғsнιη, Jesse_b, slm♦ Jul 29 at 4:24


This question has been asked before and already has an answer. If those answers do not fully address your question, please ask a new question.






marked as duplicate by αғsнιη, Jesse_b, slm♦ Jul 29 at 4:24


This question has been asked before and already has an answer. If those answers do not fully address your question, please ask a new question.













  • If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
    – steeldriver
    Jul 28 at 17:33
















  • If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
    – steeldriver
    Jul 28 at 17:33















If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
– steeldriver
Jul 28 at 17:33




If you have zsh, you could use its numeric glob qualifier paste -d, cluster_sizes_*.txt(n) > cluster_all.txt
– steeldriver
Jul 28 at 17:33










1 Answer
1






active

oldest

votes

















up vote
1
down vote



accepted










The command paste merges columns together. So, for example, if we have these 3 files then paste will create the nice result:



$ cat file_1.txt
1a
1b
1c

$ cat file_2.txt
2a
2b
2c

$ cat file_3.txt
3a
3b
3c

$ paste -d, file_1.txt file_2.txt file_3.txt
1a,2a,3a
1b,2b,3b
1c,2c,3c


So now the question is, really, how to get the files in order. We can cheat and let ls do the work for us



$ ls 
file_1.txt file_13.txt file_17.txt file_20.txt file_6.txt
file_10.txt file_14.txt file_18.txt file_3.txt file_7.txt
file_11.txt file_15.txt file_19.txt file_4.txt file_8.txt
file_12.txt file_16.txt file_2.txt file_5.txt file_9.txt

$ ls -v
file_1.txt file_5.txt file_9.txt file_13.txt file_17.txt
file_2.txt file_6.txt file_10.txt file_14.txt file_18.txt
file_3.txt file_7.txt file_11.txt file_15.txt file_19.txt
file_4.txt file_8.txt file_12.txt file_16.txt file_20.txt

$ paste -d, $(ls -v file_*.txt)
1a,2a,3a,4a,5a,6a,7a,8a,9a,10a,11a,12a,13a,14a,15a,16a,17a,18a,19a,20a
1b,2b,3b,4b,5b,6b,7b,8b,9b,10b,11b,12b,13b,14b,15b,16b,17b,18b,19b,20b
1c,2c,3c,4c,5c,6c,7c,8c,9c,10c,11c,12c,13c,14c,15c,16c,17c,18c,19c,20c


Now, beware that parsing ls is normally a bad thing. If there are any unexpected filenames or odd characters (eg whitespace, globbing) then it can break your script. But if you're confident the filenames are "good" then this will work.






share|improve this answer





















  • Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
    – Jackson Hart
    Jul 28 at 17:22










  • I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
    – Stephen Harris
    Jul 28 at 17:26











  • ok thanks i understand
    – Jackson Hart
    Jul 28 at 17:28

















1 Answer
1






active

oldest

votes








1 Answer
1






active

oldest

votes









active

oldest

votes






active

oldest

votes








up vote
1
down vote



accepted










The command paste merges columns together. So, for example, if we have these 3 files then paste will create the nice result:



$ cat file_1.txt
1a
1b
1c

$ cat file_2.txt
2a
2b
2c

$ cat file_3.txt
3a
3b
3c

$ paste -d, file_1.txt file_2.txt file_3.txt
1a,2a,3a
1b,2b,3b
1c,2c,3c


So now the question is, really, how to get the files in order. We can cheat and let ls do the work for us



$ ls 
file_1.txt file_13.txt file_17.txt file_20.txt file_6.txt
file_10.txt file_14.txt file_18.txt file_3.txt file_7.txt
file_11.txt file_15.txt file_19.txt file_4.txt file_8.txt
file_12.txt file_16.txt file_2.txt file_5.txt file_9.txt

$ ls -v
file_1.txt file_5.txt file_9.txt file_13.txt file_17.txt
file_2.txt file_6.txt file_10.txt file_14.txt file_18.txt
file_3.txt file_7.txt file_11.txt file_15.txt file_19.txt
file_4.txt file_8.txt file_12.txt file_16.txt file_20.txt

$ paste -d, $(ls -v file_*.txt)
1a,2a,3a,4a,5a,6a,7a,8a,9a,10a,11a,12a,13a,14a,15a,16a,17a,18a,19a,20a
1b,2b,3b,4b,5b,6b,7b,8b,9b,10b,11b,12b,13b,14b,15b,16b,17b,18b,19b,20b
1c,2c,3c,4c,5c,6c,7c,8c,9c,10c,11c,12c,13c,14c,15c,16c,17c,18c,19c,20c


Now, beware that parsing ls is normally a bad thing. If there are any unexpected filenames or odd characters (eg whitespace, globbing) then it can break your script. But if you're confident the filenames are "good" then this will work.






share|improve this answer





















  • Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
    – Jackson Hart
    Jul 28 at 17:22










  • I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
    – Stephen Harris
    Jul 28 at 17:26











  • ok thanks i understand
    – Jackson Hart
    Jul 28 at 17:28














up vote
1
down vote



accepted










The command paste merges columns together. So, for example, if we have these 3 files then paste will create the nice result:



$ cat file_1.txt
1a
1b
1c

$ cat file_2.txt
2a
2b
2c

$ cat file_3.txt
3a
3b
3c

$ paste -d, file_1.txt file_2.txt file_3.txt
1a,2a,3a
1b,2b,3b
1c,2c,3c


So now the question is, really, how to get the files in order. We can cheat and let ls do the work for us



$ ls 
file_1.txt file_13.txt file_17.txt file_20.txt file_6.txt
file_10.txt file_14.txt file_18.txt file_3.txt file_7.txt
file_11.txt file_15.txt file_19.txt file_4.txt file_8.txt
file_12.txt file_16.txt file_2.txt file_5.txt file_9.txt

$ ls -v
file_1.txt file_5.txt file_9.txt file_13.txt file_17.txt
file_2.txt file_6.txt file_10.txt file_14.txt file_18.txt
file_3.txt file_7.txt file_11.txt file_15.txt file_19.txt
file_4.txt file_8.txt file_12.txt file_16.txt file_20.txt

$ paste -d, $(ls -v file_*.txt)
1a,2a,3a,4a,5a,6a,7a,8a,9a,10a,11a,12a,13a,14a,15a,16a,17a,18a,19a,20a
1b,2b,3b,4b,5b,6b,7b,8b,9b,10b,11b,12b,13b,14b,15b,16b,17b,18b,19b,20b
1c,2c,3c,4c,5c,6c,7c,8c,9c,10c,11c,12c,13c,14c,15c,16c,17c,18c,19c,20c


Now, beware that parsing ls is normally a bad thing. If there are any unexpected filenames or odd characters (eg whitespace, globbing) then it can break your script. But if you're confident the filenames are "good" then this will work.






share|improve this answer





















  • Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
    – Jackson Hart
    Jul 28 at 17:22










  • I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
    – Stephen Harris
    Jul 28 at 17:26











  • ok thanks i understand
    – Jackson Hart
    Jul 28 at 17:28












up vote
1
down vote



accepted







up vote
1
down vote



accepted






The command paste merges columns together. So, for example, if we have these 3 files then paste will create the nice result:



$ cat file_1.txt
1a
1b
1c

$ cat file_2.txt
2a
2b
2c

$ cat file_3.txt
3a
3b
3c

$ paste -d, file_1.txt file_2.txt file_3.txt
1a,2a,3a
1b,2b,3b
1c,2c,3c


So now the question is, really, how to get the files in order. We can cheat and let ls do the work for us



$ ls 
file_1.txt file_13.txt file_17.txt file_20.txt file_6.txt
file_10.txt file_14.txt file_18.txt file_3.txt file_7.txt
file_11.txt file_15.txt file_19.txt file_4.txt file_8.txt
file_12.txt file_16.txt file_2.txt file_5.txt file_9.txt

$ ls -v
file_1.txt file_5.txt file_9.txt file_13.txt file_17.txt
file_2.txt file_6.txt file_10.txt file_14.txt file_18.txt
file_3.txt file_7.txt file_11.txt file_15.txt file_19.txt
file_4.txt file_8.txt file_12.txt file_16.txt file_20.txt

$ paste -d, $(ls -v file_*.txt)
1a,2a,3a,4a,5a,6a,7a,8a,9a,10a,11a,12a,13a,14a,15a,16a,17a,18a,19a,20a
1b,2b,3b,4b,5b,6b,7b,8b,9b,10b,11b,12b,13b,14b,15b,16b,17b,18b,19b,20b
1c,2c,3c,4c,5c,6c,7c,8c,9c,10c,11c,12c,13c,14c,15c,16c,17c,18c,19c,20c


Now, beware that parsing ls is normally a bad thing. If there are any unexpected filenames or odd characters (eg whitespace, globbing) then it can break your script. But if you're confident the filenames are "good" then this will work.






share|improve this answer













The command paste merges columns together. So, for example, if we have these 3 files then paste will create the nice result:



$ cat file_1.txt
1a
1b
1c

$ cat file_2.txt
2a
2b
2c

$ cat file_3.txt
3a
3b
3c

$ paste -d, file_1.txt file_2.txt file_3.txt
1a,2a,3a
1b,2b,3b
1c,2c,3c


So now the question is, really, how to get the files in order. We can cheat and let ls do the work for us



$ ls 
file_1.txt file_13.txt file_17.txt file_20.txt file_6.txt
file_10.txt file_14.txt file_18.txt file_3.txt file_7.txt
file_11.txt file_15.txt file_19.txt file_4.txt file_8.txt
file_12.txt file_16.txt file_2.txt file_5.txt file_9.txt

$ ls -v
file_1.txt file_5.txt file_9.txt file_13.txt file_17.txt
file_2.txt file_6.txt file_10.txt file_14.txt file_18.txt
file_3.txt file_7.txt file_11.txt file_15.txt file_19.txt
file_4.txt file_8.txt file_12.txt file_16.txt file_20.txt

$ paste -d, $(ls -v file_*.txt)
1a,2a,3a,4a,5a,6a,7a,8a,9a,10a,11a,12a,13a,14a,15a,16a,17a,18a,19a,20a
1b,2b,3b,4b,5b,6b,7b,8b,9b,10b,11b,12b,13b,14b,15b,16b,17b,18b,19b,20b
1c,2c,3c,4c,5c,6c,7c,8c,9c,10c,11c,12c,13c,14c,15c,16c,17c,18c,19c,20c


Now, beware that parsing ls is normally a bad thing. If there are any unexpected filenames or odd characters (eg whitespace, globbing) then it can break your script. But if you're confident the filenames are "good" then this will work.







share|improve this answer













share|improve this answer



share|improve this answer











answered Jul 28 at 17:13









Stephen Harris

21.1k23771




21.1k23771











  • Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
    – Jackson Hart
    Jul 28 at 17:22










  • I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
    – Stephen Harris
    Jul 28 at 17:26











  • ok thanks i understand
    – Jackson Hart
    Jul 28 at 17:28
















  • Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
    – Jackson Hart
    Jul 28 at 17:22










  • I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
    – Stephen Harris
    Jul 28 at 17:26











  • ok thanks i understand
    – Jackson Hart
    Jul 28 at 17:28















Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
– Jackson Hart
Jul 28 at 17:22




Thanks, I had a question. If I did put them in order, as a practice run, which I did, why does this not work? It seems like the columns are not separated out as they should be. Note that the column length from one file to another can change, so I dont know if that effects copying into excel.
– Jackson Hart
Jul 28 at 17:22












I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
– Stephen Harris
Jul 28 at 17:26





I don't understand your comment. I just made file_2.txt have 4 lines, whereas the rest are 3 lines, and the paste command made the last line ,2d,,,,,,,,,,,,,,,,,, correctly, as expected. I expect your method of "copying into excel" may be broken. Remember, the default paste separator is a TAB and multiple TABs may not copy cleanly.
– Stephen Harris
Jul 28 at 17:26













ok thanks i understand
– Jackson Hart
Jul 28 at 17:28




ok thanks i understand
– Jackson Hart
Jul 28 at 17:28


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