Run command for every 10 folders unserialized

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i have 100 folders: S001 S003 S004 S005 S006 ... S108
I need to run docker image for every folder for 10 folder simultaneously, so what i'm trying to do with code:

for d in /path/to/folder/S001..012; do num=$d##*S && 
docker run -it --cpuset-cpus="10-39" --rm -v /path/to/folder:/bids -v 
/path/to/out:/out -v 
/license.txt:/opt/freesurfer/license.txt -- 
entrypoint=/opt/freesurfer/bin/recon-all poldracklab/fmriprep:latest -i 
/bids/S"$num"/anat/S"$num"_T1w.nii.gz -subjid P"$num" -sd 
/out -all; done

It's working, but i want make this command unserialized, so command will run all 10 folder simultaneously. I think the mistake is in S001..012, it's not a correct way to implement all numbers, 1-12, since i have passed numbers.

asked 36 mins ago

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up vote
0
down vote

favorite

i have 100 folders: S001 S003 S004 S005 S006 ... S108
I need to run docker image for every folder for 10 folder simultaneously, so what i'm trying to do with code:

for d in /path/to/folder/S001..012; do num=$d##*S && 
docker run -it --cpuset-cpus="10-39" --rm -v /path/to/folder:/bids -v 
/path/to/out:/out -v 
/license.txt:/opt/freesurfer/license.txt -- 
entrypoint=/opt/freesurfer/bin/recon-all poldracklab/fmriprep:latest -i 
/bids/S"$num"/anat/S"$num"_T1w.nii.gz -subjid P"$num" -sd 
/out -all; done

asked 36 mins ago

Relyativist

114

add a commentÂ |Â

up vote
0
down vote

favorite

i have 100 folders: S001 S003 S004 S005 S006 ... S108
I need to run docker image for every folder for 10 folder simultaneously, so what i'm trying to do with code:

for d in /path/to/folder/S001..012; do num=$d##*S && 
docker run -it --cpuset-cpus="10-39" --rm -v /path/to/folder:/bids -v 
/path/to/out:/out -v 
/license.txt:/opt/freesurfer/license.txt -- 
entrypoint=/opt/freesurfer/bin/recon-all poldracklab/fmriprep:latest -i 
/bids/S"$num"/anat/S"$num"_T1w.nii.gz -subjid P"$num" -sd 
/out -all; done

asked 36 mins ago

Relyativist

114

i have 100 folders: S001 S003 S004 S005 S006 ... S108
I need to run docker image for every folder for 10 folder simultaneously, so what i'm trying to do with code:

for d in /path/to/folder/S001..012; do num=$d##*S && 
docker run -it --cpuset-cpus="10-39" --rm -v /path/to/folder:/bids -v 
/path/to/out:/out -v 
/license.txt:/opt/freesurfer/license.txt -- 
entrypoint=/opt/freesurfer/bin/recon-all poldracklab/fmriprep:latest -i 
/bids/S"$num"/anat/S"$num"_T1w.nii.gz -subjid P"$num" -sd 
/out -all; done

bash for

asked 36 mins ago

Relyativist

114

asked 36 mins ago

Relyativist

114

asked 36 mins ago

Relyativist

114

asked 36 mins ago

Relyativist

114

asked 36 mins ago

Relyativist

114

add a commentÂ |Â

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